Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs3214259 chr17:10223573 TA/T 2.57E-5 281 26.28 25.57 15.53 KM Plot
KIRP rs332233 chr15:64367745 T/C 2.89E-5 285 28.17 24.22 19.7 KM Plot
KIRP rs332242 chr15:64353034 G/T 1.08E-5 284 28.07 24.8 19.7 KM Plot
KIRP rs332258 chr15:64388052 G/C 0.000138 284 27.75 24.8 13.27 KM Plot
KIRP rs332261 chr15:64383029 A/G 4.32E-5 289 16.57 23.6 28.03 KM Plot
KIRP rs33932084 chr6:28268824 A/G 1.43E-8 289 25.57 29.2 9.77 KM Plot
KIRP rs33941255 chr5:136505212 GCA/G 4.5E-10 286 10.97 33.18 25.57 KM Plot
KIRP rs33951924 chr4:37695455 TC/T 5.51E-6 287 25.6 29.87 16.45 KM Plot
KIRP rs34038546 chr6:27607660 C/A 1.21E-8 288 25.58 29.2 9.77 KM Plot
KIRP rs34064842 chr6:27688625 G/T 1.18E-8 288 25.62 28.17 9.77 KM Plot
KIRP rs34105070 chr6:27560805 C/T 1.21E-8 289 25.58 28.68 9.77 KM Plot
KIRP rs34107459 chr6:26328353 T/C 1.52E-8 287 25.5 29.67 9.77 KM Plot
KIRP rs34119086 chr6:28562247 TG/T 2.46E-8 282 25.57 28.02 9.77 KM Plot
KIRP rs34123051 chr15:64428120 CA/C 0.000182 283 18.03 23.63 27.75 KM Plot
KIRP rs34150729 chr6:27388754 T/C 1.55E-8 289 25.5 28.57 9.77 KM Plot